Build RAG Chatbot with Haystack, Zilliz Cloud, Google Vertex AI Gemini 2.0 Flash-Lite, and STACKIT e5-mistral-7b-instruct

Introduction to RAG

Retrieval-Augmented Generation (RAG) is a game-changer for GenAI applications, especially in conversational AI. It combines the power of pre-trained large language models (LLMs) like OpenAI’s GPT with external knowledge sources stored in vector databases such as Milvus and Zilliz Cloud, allowing for more accurate, contextually relevant, and up-to-date response generation. A RAG pipeline usually consists of four basic components: a vector database, an embedding model, an LLM, and a framework.

Key Components We'll Use for This RAG Chatbot

This tutorial shows you how to build a simple RAG chatbot in Python using the following components:

Haystack: An open-source Python framework designed for building production-ready NLP applications, particularly question answering and semantic search systems. Haystack excels at retrieving information from large document collections through its modular architecture that combines retrieval and reader components. Ideal for developers creating search applications, chatbots, and knowledge management systems that require efficient document processing and accurate information extraction from unstructured text.
Zilliz Cloud: a fully managed vector database-as-a-service platform built on top of the open-source Milvus, designed to handle high-performance vector data processing at scale. It enables organizations to efficiently store, search, and analyze large volumes of unstructured data, such as text, images, or audio, by leveraging advanced vector search technology. It offers a free tier supporting up to 1 million vectors.
Google Vertex AI Gemini 2.0 Flash-Lite: A lightweight, high-speed AI model optimized for rapid inference and low-latency applications. Designed for scalability and cost-efficiency, it excels in real-time processing, large-scale deployments, and scenarios requiring quick decision-making, such as chatbots, dynamic content generation, and real-time analytics. Ideal for enterprises prioritizing performance and resource optimization.
STACKIT e5-mistral-7b-instruct: A 7B-parameter language model optimized for instruction-based tasks, delivering efficient, context-aware responses. Excels in natural language understanding, scalability, and low-latency performance. Ideal for enterprise automation, customer support, technical documentation, and generating structured outputs from complex prompts. Combines precision with adaptability for business-critical AI applications.

By the end of this tutorial, you’ll have a functional chatbot capable of answering questions based on a custom knowledge base.

Note: Since we may use proprietary models in our tutorials, make sure you have the required API key beforehand.

Step 1: Install and Set Up Haystack

import os
import requests

from haystack import Pipeline
from haystack.components.converters import MarkdownToDocument

from haystack.components.preprocessors import DocumentSplitter
from haystack.components.writers import DocumentWriter

Step 2: Install and Set Up Google Vertex AI Gemini 2.0 Flash-Lite

Using theVertexAIGeminiGenerator with Haystack requires authentication using Google Cloud Application Default Credentials (ADCs). This means your application must be set up with credentials that allow it to access Google Cloud services. If you're not sure how to configure ADCs, check the official Google documentation for setup instructions.

It's important to use a Google Cloud account that has the right permissions to access a project with Google Vertex AI endpoints. Without proper access, the generator won’t work as expected.

To find your project ID, you can either look it up in the Google Cloud Console under the resource manager or run the following command in your terminal.

Now let's install and set up this model.

pip install google-vertex-haystack

from haystack_integrations.components.generators.google_vertex import VertexAIGeminiGenerator

generator = VertexAIGeminiGenerator(model="gemini-1.5-flash")

Step 3: Install and Set Up STACKIT e5-mistral-7b-instruct

pip install stackit-haystack

from haystack_integrations.components.embedders.stackit import STACKITTextEmbedder
from haystack_integrations.components.embedders.stackit import STACKITDocumentEmbedder

text_embedder = STACKITTextEmbedder(model="intfloat/e5-mistral-7b-instruct")
document_embedder = STACKITDocumentEmbedder(model="intfloat/e5-mistral-7b-instruct")

Step 4: Install and Set Up Zilliz Cloud

pip install --upgrade pymilvus milvus-haystack

from milvus_haystack import MilvusDocumentStore
from milvus_haystack.milvus_embedding_retriever import MilvusEmbeddingRetriever

document_store = MilvusDocumentStore(connection_args={"uri": ZILLIZ_CLOUD_URI, "token": ZILLIZ_CLOUD_TOKEN}, drop_old=True,)
retriever = MilvusEmbeddingRetriever(document_store=document_store, top_k=3)

Step 5: Build a RAG Chatbot

Now that you’ve set up all components, let’s start to build a simple chatbot. We’ll use the Milvus introduction doc as a private knowledge base. You can replace it your own dataset to customize your RAG chatbot.

url = 'https://raw.githubusercontent.com/milvus-io/milvus-docs/refs/heads/v2.5.x/site/en/about/overview.md'
example_file = 'example_file.md'
response = requests.get(url)
with open(example_file, 'wb') as f:
    f.write(response.content)
file_paths = [example_file]  # You can replace it with your own file paths.

indexing_pipeline = Pipeline()
indexing_pipeline.add_component("converter", MarkdownToDocument())
indexing_pipeline.add_component("splitter", DocumentSplitter(split_by="sentence", split_length=2))
indexing_pipeline.add_component("embedder", document_embedder)
indexing_pipeline.add_component("writer", DocumentWriter(document_store))
indexing_pipeline.connect("converter", "splitter")
indexing_pipeline.connect("splitter", "embedder")
indexing_pipeline.connect("embedder", "writer")
indexing_pipeline.run({"converter": {"sources": file_paths}})

# print("Number of documents:", document_store.count_documents())
  
question = "What is Milvus?"  # You can replace it with your own question.

retrieval_pipeline = Pipeline()
retrieval_pipeline.add_component("embedder", text_embedder)
retrieval_pipeline.add_component("retriever", retriever)
retrieval_pipeline.connect("embedder", "retriever")

retrieval_results = retrieval_pipeline.run({"embedder": {"text": question}})

# for doc in retrieval_results["retriever"]["documents"]:
#     print(doc.content)
#     print("-" * 10)

from haystack.utils import Secret
from haystack.components.builders import PromptBuilder

retriever = MilvusEmbeddingRetriever(document_store=document_store, top_k=3) 
 text_embedder = STACKITTextEmbedder(model="intfloat/e5-mistral-7b-instruct")

prompt_template = """Answer the following query based on the provided context. If the context does
                     not include an answer, reply with 'I don't know'.\n
                     Query: {{query}}
                     Documents:
                     {% for doc in documents %}
                        {{ doc.content }}
                     {% endfor %}
                     Answer: 
                  """

rag_pipeline = Pipeline()
rag_pipeline.add_component("text_embedder", text_embedder)
rag_pipeline.add_component("retriever", retriever)
rag_pipeline.add_component("prompt_builder", PromptBuilder(template=prompt_template))
rag_pipeline.add_component("generator", generator)
rag_pipeline.connect("text_embedder.embedding", "retriever.query_embedding")
rag_pipeline.connect("retriever.documents", "prompt_builder.documents")
rag_pipeline.connect("prompt_builder", "generator")

results = rag_pipeline.run({"text_embedder": {"text": question}, "prompt_builder": {"query": question},})
print('RAG answer:\n', results["generator"]["replies"][0])

Optimization Tips

As you build your RAG system, optimization is key to ensuring peak performance and efficiency. While setting up the components is an essential first step, fine-tuning each one will help you create a solution that works even better and scales seamlessly. In this section, we’ll share some practical tips for optimizing all these components, giving you the edge to build smarter, faster, and more responsive RAG applications.

Haystack optimization tips

To optimize Haystack in a RAG setup, ensure you use an efficient retriever like FAISS or Milvus for scalable and fast similarity searches. Fine-tune your document store settings, such as indexing strategies and storage backends, to balance speed and accuracy. Use batch processing for embedding generation to reduce latency and optimize API calls. Leverage Haystack's pipeline caching to avoid redundant computations, especially for frequently queried documents. Tune your reader model by selecting a lightweight yet accurate transformer-based model like DistilBERT to speed up response times. Implement query rewriting or filtering techniques to enhance retrieval quality, ensuring the most relevant documents are retrieved for generation. Finally, monitor system performance with Haystack’s built-in evaluation tools to iteratively refine your setup based on real-world query performance.

Zilliz Cloud optimization tips

Optimizing Zilliz Cloud for a RAG system involves efficient index selection, query tuning, and resource management. Use Hierarchical Navigable Small World (HNSW) indexing for high-speed, approximate nearest neighbor search while balancing recall and efficiency. Fine-tune ef_construction and M parameters based on your dataset size and query workload to optimize search accuracy and latency. Enable dynamic scaling to handle fluctuating workloads efficiently, ensuring smooth performance under varying query loads. Implement data partitioning to improve retrieval speed by grouping related data, reducing unnecessary comparisons. Regularly update and optimize embeddings to keep results relevant, particularly when dealing with evolving datasets. Use hybrid search techniques, such as combining vector and keyword search, to improve response quality. Monitor system metrics in Zilliz Cloud’s dashboard and adjust configurations accordingly to maintain low-latency, high-throughput performance.

Google Vertex AI Gemini 2.0 Flash-Lite optimization tips

Optimize Gemini 2.0 Flash-Lite in RAG by preprocessing inputs to remove noise and standardize formats, ensuring cleaner context for retrieval. Adjust temperature and top-k values to balance creativity and relevance in outputs. Use smaller document chunks (e.g., 512 tokens) during retrieval to reduce latency and improve alignment with the model’s token limits. Cache frequent queries and responses to lower API costs and latency. Enable streaming for real-time applications and batch requests where feasible. Regularly validate outputs for accuracy and trim redundant content. Fine-tune with domain-specific data if available, and monitor usage metrics to adjust scaling dynamically.

STACKIT e5-mistral-7b-instruct optimization tips

To optimize STACKIT e5-mistral-7b-instruct in RAG, ensure input context is well-structured with clear document chunks (≤512 tokens) and metadata for precise retrieval. Use dynamic temperature and top-p sampling to balance creativity and relevance. Fine-tune retrieval thresholds to minimize irrelevant context injection. Batch process queries for GPU efficiency, and enable FlashAttention for faster inference. Precompute embeddings for static data to reduce latency. Regularly evaluate retrieval accuracy and model outputs via metrics like Hit Rate and ROUGE, adjusting prompts and chunk sizes iteratively.

By implementing these tips across your components, you'll be able to enhance the performance and functionality of your RAG system, ensuring it’s optimized for both speed and accuracy. Keep testing, iterating, and refining your setup to stay ahead in the ever-evolving world of AI development.

RAG Cost Calculator: A Free Tool to Calculate Your Cost in Seconds

Estimating the cost of a Retrieval-Augmented Generation (RAG) pipeline involves analyzing expenses across vector storage, compute resources, and API usage. Key cost drivers include vector database queries, embedding generation, and LLM inference.

RAG Cost Calculator is a free tool that quickly estimates the cost of building a RAG pipeline, including chunking, embedding, vector storage/search, and LLM generation. It also helps you identify cost-saving opportunities and achieve up to 10x cost reduction on vector databases with the serverless option.

Calculate your RAG cost now.

Calculate your RAG cost

What Have You Learned?

By diving into this tutorial, you’ve unlocked the power of combining cutting-edge tools to build a robust RAG system from the ground up! You learned how Haystack acts as the flexible framework that ties everything together, simplifying pipeline orchestration and letting you focus on creativity instead of complexity. Zilliz Cloud stepped in as your high-performance vector database, handling lightning-fast similarity searches to retrieve the most relevant information from vast datasets. Then, Google Vertex AI Gemini 2.0 Flash-Lite brought the magic as your LLM, transforming retrieved context into coherent, human-like responses with impressive speed and accuracy. Meanwhile, the STACKIT e5-mistral-7b-instruct embedding model proved its worth by converting raw data into meaningful vector representations, ensuring your system understands nuances and relationships in your content. Along the way, you picked up pro tips for optimizing performance—like balancing latency with accuracy and tuning chunk sizes—and even discovered a free RAG cost calculator to estimate expenses and scale smarter.

Now that you’ve seen how these pieces fit together seamlessly, imagine the possibilities! Whether you’re building customer support bots, research assistants, or personalized recommendation engines, you’ve got the tools to turn ideas into reality. The best part? You’re not just following steps—you’re gaining the skills to experiment, tweak, and innovate. So go ahead: refine those retrieval strategies, play with different LLMs, and push the boundaries of what your RAG applications can do. The future of intelligent systems is in your hands, and there’s no better time to start building. Let’s get out there and create something awesome—you’ve got this! 🚀

Further Resources

🌟 In addition to this RAG tutorial, unleash your full potential with these incredible resources to level up your RAG skills.

How to Build a Multimodal RAG | Documentation
How to Enhance the Performance of Your RAG Pipeline
Graph RAG with Milvus | Documentation
How to Evaluate RAG Applications - Zilliz Learn
Generative AI Resource Hub | Zilliz

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