Build RAG Chatbot with Llamaindex, HNSWlib, Cohere Command R+, and Mistral Embed

Introduction to RAG

Retrieval-Augmented Generation (RAG) is a game-changer for GenAI applications, especially in conversational AI. It combines the power of pre-trained large language models (LLMs) like OpenAI’s GPT with external knowledge sources stored in vector databases such as Milvus and Zilliz Cloud, allowing for more accurate, contextually relevant, and up-to-date response generation. A RAG pipeline usually consists of four basic components: a vector database, an embedding model, an LLM, and a framework.

Key Components We'll Use for This RAG Chatbot

This tutorial shows you how to build a simple RAG chatbot in Python using the following components:

Llamaindex: a data framework that connects large language models (LLMs) with various data sources, enabling efficient retrieval-augmented generation (RAG). It helps structure, index, and query private or external data, optimizing LLM applications for search, chatbots, and analytics.
HNSWlib: a high-performance C++ and Python library for approximate nearest neighbor (ANN) search using the Hierarchical Navigable Small World (HNSW) algorithm. It provides fast, scalable, and efficient similarity search in high-dimensional spaces, making it ideal for vector databases and AI applications.
Cohere Command R+: A state-of-the-art enterprise-focused LLM optimized for high-efficiency Retrieval-Augmented Generation (RAG) and tool use, designed to automate complex workflows. Strengths include multilingual support, scalability, and robust accuracy for enterprise-grade applications. Ideal for automating customer support, data analysis, and knowledge-intensive tasks while ensuring secure, reliable collaboration between AI and human teams.
Mistral Embed: A high-performance embedding model designed to convert text into dense vector representations, capturing semantic meaning for tasks like retrieval, clustering, and similarity analysis. It excels in efficiency, multilingual support, and scalability, making it ideal for semantic search engines, multilingual content organization, and large-scale data processing applications requiring rapid, context-aware text analysis.

By the end of this tutorial, you’ll have a functional chatbot capable of answering questions based on a custom knowledge base.

Note: Since we may use proprietary models in our tutorials, make sure you have the required API key beforehand.

Step 1: Install and Set Up Llamaindex

pip install llama-index

Step 2: Install and Set Up Cohere Command R+

%pip install llama-index-llms-cohere

from llama_index.llms.cohere import Cohere

llm = Cohere(model="command-r-plus", api_key=api_key)

Step 3: Install and Set Up Mistral Embed

%pip install llama-index-embeddings-mistralai

# imports
from llama_index.embeddings.mistralai import MistralAIEmbedding

# get API key and create embeddings
api_key = "YOUR API KEY"
model_name = "mistral-embed"
embed_model = MistralAIEmbedding(model_name=model_name, api_key=api_key)

Step 4: Install and Set Up HNSWlib

%pip install llama-index-vector-stores-hnswlib

from llama_index.vector_stores.hnswlib import HnswlibVectorStore
from llama_index.core import (
    VectorStoreIndex,
    StorageContext,
    SimpleDirectoryReader,
)

vector_store = HnswlibVectorStore.from_params(
    space="ip",
    dimension=embed_model._model.get_sentence_embedding_dimension(),
    max_elements=1000,
)

Step 5: Build a RAG Chatbot

Now that you’ve set up all components, let’s start to build a simple chatbot. We’ll use the Milvus introduction doc as a private knowledge base. You can replace it with your own dataset to customize your RAG chatbot.

import requests

from llama_index.core import SimpleDirectoryReader

# load documents
url = 'https://raw.githubusercontent.com/milvus-io/milvus-docs/refs/heads/v2.5.x/site/en/about/overview.md'
example_file = 'example_file.md'  # You can replace it with your own file paths.
response = requests.get(url)
with open(example_file, 'wb') as f:
    f.write(response.content)
documents = SimpleDirectoryReader(
    input_files=[example_file]
).load_data()

print("Document ID:", documents[0].doc_id)

storage_context = StorageContext.from_defaults(vector_store=vector_store)
index = VectorStoreIndex.from_documents(
    documents, storage_context=storage_context, embed_model=embed_model
)

query_engine = index.as_query_engine(llm=llm)
res = query_engine.query("What is Milvus?")  # You can replace it with your own question.
print(res)

Example output

Milvus is a high-performance, highly scalable vector database designed to operate efficiently across various environments, from personal laptops to large-scale distributed systems. It is available as both open-source software and a cloud service. Milvus excels in managing unstructured data by converting it into numerical vectors through embeddings, which facilitates fast and scalable searches and analytics. The database supports a wide range of data types and offers robust data modeling capabilities, allowing users to organize their data effectively. Additionally, Milvus provides multiple deployment options, including a lightweight version for quick prototyping and a distributed version for handling massive data scales.

Optimization Tips

As you build your RAG system, optimization is key to ensuring peak performance and efficiency. While setting up the components is an essential first step, fine-tuning each one will help you create a solution that works even better and scales seamlessly. In this section, we’ll share some practical tips for optimizing all these components, giving you the edge to build smarter, faster, and more responsive RAG applications.

LlamaIndex optimization tips

To optimize LlamaIndex for a Retrieval-Augmented Generation (RAG) setup, structure your data efficiently using hierarchical indices like tree-based or keyword-table indices for faster retrieval. Use embeddings that align with your use case to improve search relevance. Fine-tune chunk sizes to balance context length and retrieval precision. Enable caching for frequently accessed queries to enhance performance. Optimize metadata filtering to reduce unnecessary search space and improve speed. If using vector databases, ensure indexing strategies align with your query patterns. Implement async processing to handle large-scale document ingestion efficiently. Regularly monitor query performance and adjust indexing parameters as needed for optimal results.

HNSWlib optimization tips

To optimize HNSWlib for a Retrieval-Augmented Generation (RAG) setup, fine-tune the M parameter (number of connections per node) to balance accuracy and memory usage—higher values improve recall but increase indexing time. Adjust ef_construction (search depth during indexing) to enhance retrieval quality. During queries, set ef_search dynamically based on latency vs. accuracy trade-offs. Use multi-threading for faster indexing and querying. Ensure vectors are properly normalized for consistent similarity comparisons. If working with large datasets, periodically rebuild the index to maintain efficiency. Store the index on disk and load it efficiently for persistence in production environments. Monitor query performance and tweak parameters to achieve optimal speed-recall balance.

Cohere Command R+ optimization tips

To optimize Cohere Command R+ in a RAG setup, preprocess input queries by chunking large texts and filtering irrelevant context to reduce noise. Use retrieval-friendly parameters like temperature=0.3 for focused responses and max_tokens=512 to balance detail and conciseness. Fine-tune document retrieval with semantic reranking and metadata filtering to prioritize high-relevance sources. Enable confidence_score to validate output reliability, and cache frequent queries to reduce latency. Monitor token usage and response quality to iteratively adjust retrieval thresholds and generation settings for cost-performance balance.

Mistral Embed optimization tips

To optimize Mistral Embed in a RAG setup, preprocess text by removing redundant whitespace, special characters, and normalizing casing to reduce embedding noise. Use batch processing for bulk embeddings to leverage GPU parallelism. Fine-tune Mistral Embed on domain-specific data if retrieval accuracy is low. Reduce input sequence length via truncation or sliding windows for long documents. Cache frequent queries to save compute. Test different pooling strategies (mean, max) for sentence-level embeddings and normalize outputs to improve similarity scoring consistency.

By implementing these tips across your components, you'll be able to enhance the performance and functionality of your RAG system, ensuring it’s optimized for both speed and accuracy. Keep testing, iterating, and refining your setup to stay ahead in the ever-evolving world of AI development.

RAG Cost Calculator: A Free Tool to Calculate Your Cost in Seconds

Estimating the cost of a Retrieval-Augmented Generation (RAG) pipeline involves analyzing expenses across vector storage, compute resources, and API usage. Key cost drivers include vector database queries, embedding generation, and LLM inference.

RAG Cost Calculator is a free tool that quickly estimates the cost of building a RAG pipeline, including chunking, embedding, vector storage/search, and LLM generation. It also helps you identify cost-saving opportunities and achieve up to 10x cost reduction on vector databases with the serverless option.

Calculate your RAG cost now.

Calculate your RAG cost

What Have You Learned?

Wow! What a journey we've had diving into the world of Retrieval-Augmented Generation (RAG) systems! After exploring this tutorial, you now have a solid understanding of how to seamlessly integrate essential components like LlamaIndex, HNSWlib, Cohere Command R+, and the Mistral Embed model into your very own RAG pipeline. You've seen how LlamaIndex acts as the backbone, efficiently managing and indexing your data, while HNSWlib provides an effective vector database that ensures your searches are lightning-fast. The dynamic capabilities of Cohere Command R+ empower your system to generate coherent responses, and the Mistral Embed model gives you the ability to convert complex information into meaningful embeddings that can be easily understood and manipulated.

But wait, there’s more! We also shared some nifty optimization tips to enhance your implementation, making your RAG system not only powerful but also efficient. And for those looking to dive even deeper into optimizing costs, the free RAG cost calculator is an incredible resource that'll help you manage expenses as you grow your project. So what are you waiting for? The possibilities in the world of RAG applications are boundless! Go ahead, unleash your creativity, innovate, and take your first steps in building, optimizing, and dreaming up your groundbreaking applications. The journey starts now, and we can’t wait to see what you will create!

Further Resources

🌟 In addition to this RAG tutorial, unleash your full potential with these incredible resources to level up your RAG skills.

How to Build a Multimodal RAG | Documentation
How to Enhance the Performance of Your RAG Pipeline
Graph RAG with Milvus | Documentation
How to Evaluate RAG Applications - Zilliz Learn
Generative AI Resource Hub | Zilliz

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