Build RAG Chatbot with Haystack, Zilliz Cloud, Mistral Small, and Optimum mpnet-base-v2

Introduction to RAG

Retrieval-Augmented Generation (RAG) is a game-changer for GenAI applications, especially in conversational AI. It combines the power of pre-trained large language models (LLMs) like OpenAI’s GPT with external knowledge sources stored in vector databases such as Milvus and Zilliz Cloud, allowing for more accurate, contextually relevant, and up-to-date response generation. A RAG pipeline usually consists of four basic components: a vector database, an embedding model, an LLM, and a framework.

Key Components We'll Use for This RAG Chatbot

This tutorial shows you how to build a simple RAG chatbot in Python using the following components:

Haystack: An open-source Python framework designed for building production-ready NLP applications, particularly question answering and semantic search systems. Haystack excels at retrieving information from large document collections through its modular architecture that combines retrieval and reader components. Ideal for developers creating search applications, chatbots, and knowledge management systems that require efficient document processing and accurate information extraction from unstructured text.
Zilliz Cloud: a fully managed vector database-as-a-service platform built on top of the open-source Milvus, designed to handle high-performance vector data processing at scale. It enables organizations to efficiently store, search, and analyze large volumes of unstructured data, such as text, images, or audio, by leveraging advanced vector search technology. It offers a free tier supporting up to 1 million vectors.
Mistral Small: A compact, high-efficiency AI model optimized for fast text processing and real-time applications. It excels in tasks like conversational AI, text summarization, and content moderation, offering low latency and cost-effective performance. Ideal for businesses and developers seeking scalable NLP solutions with minimal computational overhead.
Optimum mpnet-base-v2: A high-performance model designed for sentence-level tasks, Optimum mpnet-base-v2 is optimized for semantic textual similarity, classification, and retrieval applications. Its efficient architecture excels in both speed and accuracy, making it ideal for use cases in natural language understanding, search, and recommendation systems.

By the end of this tutorial, you’ll have a functional chatbot capable of answering questions based on a custom knowledge base.

Note: Since we may use proprietary models in our tutorials, make sure you have the required API key beforehand.

Step 1: Install and Set Up Haystack

import os
import requests

from haystack import Pipeline
from haystack.components.converters import MarkdownToDocument

from haystack.components.preprocessors import DocumentSplitter
from haystack.components.writers import DocumentWriter

Step 2: Install and Set Up Mistral Small

To use Mistral models, you need first to get a Mistral API key. You can write this key in:

The api_key init parameter using Secret API
The MISTRAL_API_KEY environment variable (recommended)

Now, after you get the API key, let's install the Install the mistral-haystack package.

pip install mistral-haystack

from haystack_integrations.components.generators.mistral import MistralChatGenerator
from haystack.components.generators.utils import print_streaming_chunk
from haystack.dataclasses import ChatMessage
from haystack.utils import Secret

generator = MistralChatGenerator(api_key=Secret.from_env_var("MISTRAL_API_KEY"), streaming_callback=print_streaming_chunk, model='mistral-small-latest')

Step 3: Install and Set Up Optimum mpnet-base-v2

Haystack's OptimumTextEmbedder embeds text strings using models loaded with the HuggingFace Optimum library. It uses the ONNX runtime for high-speed inference. Similarly to other Embedders, this component allows adding prefixes (and suffixes) to include instructions. For more details, refer to the Optimum API Reference.

pip install optimum-haystack

from haystack_integrations.components.embedders.optimum import OptimumTextEmbedder
from haystack.dataclasses import Document
from haystack_integrations.components.embedders.optimum import OptimumDocumentEmbedder

text_embedder = OptimumTextEmbedder(model="sentence-transformers")
text_embedder.warm_up()

document_embedder = OptimumDocumentEmbedder(model="sentence-transformers/mpnet-base-v2")
document_embedder.warm_up()

Step 4: Install and Set Up Zilliz Cloud

pip install --upgrade pymilvus milvus-haystack

from milvus_haystack import MilvusDocumentStore
from milvus_haystack.milvus_embedding_retriever import MilvusEmbeddingRetriever

document_store = MilvusDocumentStore(connection_args={"uri": ZILLIZ_CLOUD_URI, "token": ZILLIZ_CLOUD_TOKEN}, drop_old=True,)
retriever = MilvusEmbeddingRetriever(document_store=document_store, top_k=3)

Step 5: Build a RAG Chatbot

Now that you’ve set up all components, let’s start to build a simple chatbot. We’ll use the Milvus introduction doc as a private knowledge base. You can replace it your own dataset to customize your RAG chatbot.

url = 'https://raw.githubusercontent.com/milvus-io/milvus-docs/refs/heads/v2.5.x/site/en/about/overview.md'
example_file = 'example_file.md'
response = requests.get(url)
with open(example_file, 'wb') as f:
    f.write(response.content)
file_paths = [example_file]  # You can replace it with your own file paths.

indexing_pipeline = Pipeline()
indexing_pipeline.add_component("converter", MarkdownToDocument())
indexing_pipeline.add_component("splitter", DocumentSplitter(split_by="sentence", split_length=2))
indexing_pipeline.add_component("embedder", document_embedder)
indexing_pipeline.add_component("writer", DocumentWriter(document_store))
indexing_pipeline.connect("converter", "splitter")
indexing_pipeline.connect("splitter", "embedder")
indexing_pipeline.connect("embedder", "writer")
indexing_pipeline.run({"converter": {"sources": file_paths}})

# print("Number of documents:", document_store.count_documents())
  
question = "What is Milvus?"  # You can replace it with your own question.

retrieval_pipeline = Pipeline()
retrieval_pipeline.add_component("embedder", text_embedder)
retrieval_pipeline.add_component("retriever", retriever)
retrieval_pipeline.connect("embedder", "retriever")

retrieval_results = retrieval_pipeline.run({"embedder": {"text": question}})

# for doc in retrieval_results["retriever"]["documents"]:
#     print(doc.content)
#     print("-" * 10)

from haystack.utils import Secret
from haystack.components.builders import PromptBuilder

retriever = MilvusEmbeddingRetriever(document_store=document_store, top_k=3) 
 text_embedder = OptimumTextEmbedder(model="sentence-transformers")
text_embedder.warm_up()

prompt_template = """Answer the following query based on the provided context. If the context does
                     not include an answer, reply with 'I don't know'.\n
                     Query: {{query}}
                     Documents:
                     {% for doc in documents %}
                        {{ doc.content }}
                     {% endfor %}
                     Answer: 
                  """

rag_pipeline = Pipeline()
rag_pipeline.add_component("text_embedder", text_embedder)
rag_pipeline.add_component("retriever", retriever)
rag_pipeline.add_component("prompt_builder", PromptBuilder(template=prompt_template))
rag_pipeline.add_component("generator", generator)
rag_pipeline.connect("text_embedder.embedding", "retriever.query_embedding")
rag_pipeline.connect("retriever.documents", "prompt_builder.documents")
rag_pipeline.connect("prompt_builder", "generator")

results = rag_pipeline.run({"text_embedder": {"text": question}, "prompt_builder": {"query": question},})
print('RAG answer:\n', results["generator"]["replies"][0])

Optimization Tips

As you build your RAG system, optimization is key to ensuring peak performance and efficiency. While setting up the components is an essential first step, fine-tuning each one will help you create a solution that works even better and scales seamlessly. In this section, we’ll share some practical tips for optimizing all these components, giving you the edge to build smarter, faster, and more responsive RAG applications.

Haystack optimization tips

To optimize Haystack in a RAG setup, ensure you use an efficient retriever like FAISS or Milvus for scalable and fast similarity searches. Fine-tune your document store settings, such as indexing strategies and storage backends, to balance speed and accuracy. Use batch processing for embedding generation to reduce latency and optimize API calls. Leverage Haystack's pipeline caching to avoid redundant computations, especially for frequently queried documents. Tune your reader model by selecting a lightweight yet accurate transformer-based model like DistilBERT to speed up response times. Implement query rewriting or filtering techniques to enhance retrieval quality, ensuring the most relevant documents are retrieved for generation. Finally, monitor system performance with Haystack’s built-in evaluation tools to iteratively refine your setup based on real-world query performance.

Zilliz Cloud optimization tips

Optimizing Zilliz Cloud for a RAG system involves efficient index selection, query tuning, and resource management. Use Hierarchical Navigable Small World (HNSW) indexing for high-speed, approximate nearest neighbor search while balancing recall and efficiency. Fine-tune ef_construction and M parameters based on your dataset size and query workload to optimize search accuracy and latency. Enable dynamic scaling to handle fluctuating workloads efficiently, ensuring smooth performance under varying query loads. Implement data partitioning to improve retrieval speed by grouping related data, reducing unnecessary comparisons. Regularly update and optimize embeddings to keep results relevant, particularly when dealing with evolving datasets. Use hybrid search techniques, such as combining vector and keyword search, to improve response quality. Monitor system metrics in Zilliz Cloud’s dashboard and adjust configurations accordingly to maintain low-latency, high-throughput performance.

Mistral Small optimization tips

To optimize Mistral Small in a RAG setup, prioritize efficient context chunking (256-512 tokens) to balance relevance and processing speed. Use metadata filtering during retrieval to reduce noise and improve input quality. Enable FlashAttention for faster inference and lower memory usage. Fine-tune Mistral Small on domain-specific data to enhance answer accuracy. Implement query batching for parallel processing and leverage quantization (e.g., 4-bit) to reduce model size. Monitor latency and adjust temperature (0.2-0.5) to balance creativity vs. precision. Cache frequent queries to minimize redundant computations.

Optimum mpnet-base-v2 optimization tips

To optimize the performance of Optimum mpnet-base-v2 in a Retrieval-Augmented Generation (RAG) setup, consider fine-tuning the model on domain-specific data to improve its understanding of specialized queries. Leverage batch processing for efficient inference and experiment with reduced precision (e.g., mixed-precision or FP16) to speed up computation without sacrificing much accuracy. For better retrieval performance, optimize your vector store by choosing an appropriate indexing strategy, such as HNSW or IVF, and ensuring the embeddings are well-aligned with the query space. Additionally, consider using a smaller version of the model for less complex tasks to balance speed and resource usage. Regularly monitor the retrieval quality and adjust hyperparameters, such as the number of nearest neighbors, for the best results.

By implementing these tips across your components, you'll be able to enhance the performance and functionality of your RAG system, ensuring it’s optimized for both speed and accuracy. Keep testing, iterating, and refining your setup to stay ahead in the ever-evolving world of AI development.

RAG Cost Calculator: A Free Tool to Calculate Your Cost in Seconds

Estimating the cost of a Retrieval-Augmented Generation (RAG) pipeline involves analyzing expenses across vector storage, compute resources, and API usage. Key cost drivers include vector database queries, embedding generation, and LLM inference.

RAG Cost Calculator is a free tool that quickly estimates the cost of building a RAG pipeline, including chunking, embedding, vector storage/search, and LLM generation. It also helps you identify cost-saving opportunities and achieve up to 10x cost reduction on vector databases with the serverless option.

Calculate your RAG cost now.

Calculate your RAG cost

What Have You Learned?

By diving into this tutorial, you’ve unlocked the power of combining cutting-edge tools to build a robust RAG system from scratch! You’ve seen how Haystack acts as the glue, orchestrating workflows to seamlessly connect your data pipeline. With Zilliz Cloud, you learned to store and retrieve vectors at lightning speed, leveraging its scalable architecture to handle massive datasets effortlessly. The Optimum mpnet-base-v2 embedding model transformed your text into rich, meaningful vectors, ensuring your semantic search is both precise and context-aware. Then came Mistral Small, the nimble yet mighty LLM that breathed life into your system, generating human-like responses by synthesizing retrieved knowledge with creativity. Together, these tools form a dynamic RAG pipeline that’s not just functional but optimized—whether you’re answering complex questions, personalizing content, or powering AI assistants.

But wait, there’s more! You also picked up pro tips for fine-tuning performance, like tweaking chunk sizes for better embeddings or using hybrid search strategies to balance speed and accuracy. And let’s not forget the free RAG cost calculator—a game-changer for estimating expenses and scaling smartly without surprises. Now that you’ve seen how these pieces fit together, imagine the possibilities! You’re equipped to build smarter applications, experiment with optimizations, and even innovate beyond the basics. So go ahead—fire up your IDE, tweak those parameters, and start creating. The future of AI-powered solutions is in your hands, and with what you’ve learned, there’s no limit to what you can build next. Let’s make magic happen! 🚀

Further Resources

🌟 In addition to this RAG tutorial, unleash your full potential with these incredible resources to level up your RAG skills.

How to Build a Multimodal RAG | Documentation
How to Enhance the Performance of Your RAG Pipeline
Graph RAG with Milvus | Documentation
How to Evaluate RAG Applications - Zilliz Learn
Generative AI Resource Hub | Zilliz

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