Build RAG Chatbot with Haystack, Milvus, Mistral Ministral 8B, and jina-clip-v1

Introduction to RAG

Retrieval-Augmented Generation (RAG) is a game-changer for GenAI applications, especially in conversational AI. It combines the power of pre-trained large language models (LLMs) like OpenAI’s GPT with external knowledge sources stored in vector databases such as Milvus and Zilliz Cloud, allowing for more accurate, contextually relevant, and up-to-date response generation. A RAG pipeline usually consists of four basic components: a vector database, an embedding model, an LLM, and a framework.

Key Components We'll Use for This RAG Chatbot

This tutorial shows you how to build a simple RAG chatbot in Python using the following components:

Haystack: An open-source Python framework designed for building production-ready NLP applications, particularly question answering and semantic search systems. Haystack excels at retrieving information from large document collections through its modular architecture that combines retrieval and reader components. Ideal for developers creating search applications, chatbots, and knowledge management systems that require efficient document processing and accurate information extraction from unstructured text.
Milvus: An open-source vector database optimized to store, index, and search large-scale vector embeddings efficiently, perfect for use cases like RAG, semantic search, and recommender systems. If you hate to manage your own infrastructure, we recommend using Zilliz Cloud, which is a fully managed vector database service built on Milvus and offers a free tier supporting up to 1 million vectors.
Mistral Ministral 8B: A compact, high-efficiency language model optimized for scalable natural language processing. It excels in rapid text generation, multilingual tasks, and context-aware reasoning while maintaining low computational demands. Ideal for real-time chatbots, content summarization, and edge-device deployment where speed and resource efficiency are critical.
Jina-CLIP-V1: A multimodal AI model that bridges text and images via shared embeddings, enabling cross-modal retrieval and understanding. Strengths include robust generalization, efficient scalability, and seamless integration for multilingual and visual-text tasks. Ideal for image-text search, content recommendation, and enhancing AI-driven applications in e-commerce, media, and digital asset management.

By the end of this tutorial, you’ll have a functional chatbot capable of answering questions based on a custom knowledge base.

Note: Since we may use proprietary models in our tutorials, make sure you have the required API key beforehand.

Step 1: Install and Set Up Haystack

import os
import requests

from haystack import Pipeline
from haystack.components.converters import MarkdownToDocument

from haystack.components.preprocessors import DocumentSplitter
from haystack.components.writers import DocumentWriter

Step 2: Install and Set Up Mistral Ministral 8B

To use Mistral models, you need first to get a Mistral API key. You can write this key in:

The api_key init parameter using Secret API
The MISTRAL_API_KEY environment variable (recommended)

Now, after you get the API key, let's install the Install the mistral-haystack package.

pip install mistral-haystack

from haystack_integrations.components.generators.mistral import MistralChatGenerator
from haystack.components.generators.utils import print_streaming_chunk
from haystack.dataclasses import ChatMessage
from haystack.utils import Secret

generator = MistralChatGenerator(api_key=Secret.from_env_var("MISTRAL_API_KEY"), streaming_callback=print_streaming_chunk, model='ministral-8b-latest')

Step 3: Install and Set Up jina-clip-v1

pip install jina-haystack

from haystack_integrations.components.embedders.jina import JinaTextEmbedder
from haystack_integrations.components.embedders.jina import JinaDocumentEmbedder

text_embedder = JinaTextEmbedder(api_key=Secret.from_token("<your-api-key>"), model="jina-clip-v1")
document_embedder = JinaDocumentEmbedder(api_key=Secret.from_token("<your-api-key>"), model="jina-clip-v1")

Step 4: Install and Set Up Milvus

pip install --upgrade pymilvus milvus-haystack

from milvus_haystack import MilvusDocumentStore
from milvus_haystack.milvus_embedding_retriever import MilvusEmbeddingRetriever

document_store = MilvusDocumentStore(connection_args={"uri": "./milvus.db"}, drop_old=True,)
retriever = MilvusEmbeddingRetriever(document_store=document_store, top_k=3)

Step 5: Build a RAG Chatbot

Now that you’ve set up all components, let’s start to build a simple chatbot. We’ll use the Milvus introduction doc as a private knowledge base. You can replace it your own dataset to customize your RAG chatbot.

url = 'https://raw.githubusercontent.com/milvus-io/milvus-docs/refs/heads/v2.5.x/site/en/about/overview.md'
example_file = 'example_file.md'
response = requests.get(url)
with open(example_file, 'wb') as f:
    f.write(response.content)
file_paths = [example_file]  # You can replace it with your own file paths.

indexing_pipeline = Pipeline()
indexing_pipeline.add_component("converter", MarkdownToDocument())
indexing_pipeline.add_component("splitter", DocumentSplitter(split_by="sentence", split_length=2))
indexing_pipeline.add_component("embedder", document_embedder)
indexing_pipeline.add_component("writer", DocumentWriter(document_store))
indexing_pipeline.connect("converter", "splitter")
indexing_pipeline.connect("splitter", "embedder")
indexing_pipeline.connect("embedder", "writer")
indexing_pipeline.run({"converter": {"sources": file_paths}})

# print("Number of documents:", document_store.count_documents())
  
question = "What is Milvus?"  # You can replace it with your own question.

retrieval_pipeline = Pipeline()
retrieval_pipeline.add_component("embedder", text_embedder)
retrieval_pipeline.add_component("retriever", retriever)
retrieval_pipeline.connect("embedder", "retriever")

retrieval_results = retrieval_pipeline.run({"embedder": {"text": question}})

# for doc in retrieval_results["retriever"]["documents"]:
#     print(doc.content)
#     print("-" * 10)

from haystack.utils import Secret
from haystack.components.builders import PromptBuilder

retriever = MilvusEmbeddingRetriever(document_store=document_store, top_k=3) 
 text_embedder = JinaTextEmbedder(api_key=Secret.from_token("<your-api-key>"), model="jina-clip-v1")

prompt_template = """Answer the following query based on the provided context. If the context does
                     not include an answer, reply with 'I don't know'.\n
                     Query: {{query}}
                     Documents:
                     {% for doc in documents %}
                        {{ doc.content }}
                     {% endfor %}
                     Answer: 
                  """

rag_pipeline = Pipeline()
rag_pipeline.add_component("text_embedder", text_embedder)
rag_pipeline.add_component("retriever", retriever)
rag_pipeline.add_component("prompt_builder", PromptBuilder(template=prompt_template))
rag_pipeline.add_component("generator", generator)
rag_pipeline.connect("text_embedder.embedding", "retriever.query_embedding")
rag_pipeline.connect("retriever.documents", "prompt_builder.documents")
rag_pipeline.connect("prompt_builder", "generator")

results = rag_pipeline.run({"text_embedder": {"text": question}, "prompt_builder": {"query": question},})
print('RAG answer:\n', results["generator"]["replies"][0])

Optimization Tips

As you build your RAG system, optimization is key to ensuring peak performance and efficiency. While setting up the components is an essential first step, fine-tuning each one will help you create a solution that works even better and scales seamlessly. In this section, we’ll share some practical tips for optimizing all these components, giving you the edge to build smarter, faster, and more responsive RAG applications.

Haystack optimization tips

To optimize Haystack in a RAG setup, ensure you use an efficient retriever like FAISS or Milvus for scalable and fast similarity searches. Fine-tune your document store settings, such as indexing strategies and storage backends, to balance speed and accuracy. Use batch processing for embedding generation to reduce latency and optimize API calls. Leverage Haystack's pipeline caching to avoid redundant computations, especially for frequently queried documents. Tune your reader model by selecting a lightweight yet accurate transformer-based model like DistilBERT to speed up response times. Implement query rewriting or filtering techniques to enhance retrieval quality, ensuring the most relevant documents are retrieved for generation. Finally, monitor system performance with Haystack’s built-in evaluation tools to iteratively refine your setup based on real-world query performance.

Milvus optimization tips

Milvus serves as a highly efficient vector database, critical for retrieval tasks in a RAG system. To optimize its performance, ensure that indexes are properly built to balance speed and accuracy; consider utilizing HNSW (Hierarchical Navigable Small World) for efficient nearest neighbor search where response time is crucial. Partitioning data based on usage patterns can enhance query performance and reduce load times, enabling better scalability. Regularly monitor and adjust cache settings based on query frequency to avoid latency during data retrieval. Employ batch processing for vector insertions, which can minimize database lock contention and enhance overall throughput. Additionally, fine-tune the model parameters by experimenting with the dimensionality of the vectors; higher dimensions can improve retrieval accuracy but may increase search time, necessitating a balance tailored to your specific use case and hardware infrastructure.

Mistral Ministral 8B optimization tips

To optimize Mistral Ministral 8B in RAG setups, ensure input prompts are tightly formatted with clear context-question separation using [INST] tags. Use smaller retrieval chunks (256-512 tokens) to reduce noise and improve relevance. Adjust the temperature (0.1-0.3) for deterministic, fact-focused outputs. Employ a hybrid retrieval approach (dense + sparse methods) to balance precision and recall. Prune retrieved documents with cross-encoder re-rankers before feeding to the model. Limit input context length to avoid truncation, and fine-tune the model on domain-specific data for better alignment. Enable flash attention and quantization (e.g., 4-bit) to reduce latency and memory usage.

Jina-CLIP-v1 optimization tips

To optimize Jina-CLIP-v1 in a RAG setup, preprocess inputs by normalizing text and resizing images to match the model’s expected dimensions (e.g., 224x224). Use batch inference to maximize GPU utilization and enable mixed-precision (FP16) for faster processing. Fine-tune the model on domain-specific data to improve retrieval relevance. Cache frequently accessed embeddings to reduce redundant computations. Optimize vector indexing with approximate nearest neighbor (ANN) libraries like FAISS or HNSW for efficient similarity search. Regularly validate embedding quality using downstream task metrics to ensure alignment with retrieval goals.

By implementing these tips across your components, you'll be able to enhance the performance and functionality of your RAG system, ensuring it’s optimized for both speed and accuracy. Keep testing, iterating, and refining your setup to stay ahead in the ever-evolving world of AI development.

RAG Cost Calculator: A Free Tool to Calculate Your Cost in Seconds

Estimating the cost of a Retrieval-Augmented Generation (RAG) pipeline involves analyzing expenses across vector storage, compute resources, and API usage. Key cost drivers include vector database queries, embedding generation, and LLM inference.

RAG Cost Calculator is a free tool that quickly estimates the cost of building a RAG pipeline, including chunking, embedding, vector storage/search, and LLM generation. It also helps you identify cost-saving opportunities and achieve up to 10x cost reduction on vector databases with the serverless option.

Calculate your RAG cost now.

Calculate your RAG cost

What Have You Learned?

By now, you’ve unlocked the magic of building a RAG system from scratch using cutting-edge tools! You learned how Haystack acts as the backbone, seamlessly orchestrating the flow of data between components. With Milvus as your vector database, you saw how lightning-fast similarity searches can retrieve relevant context from massive datasets. Mistral MiniStrAL 8B stepped in as the brains of the operation, generating human-like answers by interpreting that retrieved context with remarkable nuance. And let’s not forget Jina-CLIP-v1, the embedding model that transformed text and even images into rich numerical representations, bridging the gap between raw data and actionable insights. Together, these tools form a powerhouse pipeline that turns information overload into precise, intelligent responses—a game-changer for chatbots, search engines, or any application needing context-aware AI.

But wait, there’s more! You also picked up pro tips for optimizing performance, like tuning chunk sizes for embeddings or balancing speed and accuracy in Milvus configurations. The free RAG cost calculator shared in the tutorial? That’s your secret weapon for budgeting real-world deployments without surprises. Imagine the possibilities now: you could enhance customer support with AI that actually understands queries, build a recommendation engine that feels psychic, or create a research assistant that sifts through papers in seconds. The tools are in your hands, and the best part? You’ve already seen how accessible this all is. So go ahead—experiment, iterate, and let your creativity run wild. The future of intelligent applications isn’t just coming; you’re building it. Start today, and who knows what you’ll invent tomorrow? 🚀

Further Resources

🌟 In addition to this RAG tutorial, unleash your full potential with these incredible resources to level up your RAG skills.

How to Build a Multimodal RAG | Documentation
How to Enhance the Performance of Your RAG Pipeline
Graph RAG with Milvus | Documentation
How to Evaluate RAG Applications - Zilliz Learn
Generative AI Resource Hub | Zilliz

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