Build RAG Chatbot with Haystack, Haystack In-memory store, Cohere Command R, and BAAI llm-embedder
Introduction to RAG
Retrieval-Augmented Generation (RAG) is a game-changer for GenAI applications, especially in conversational AI. It combines the power of pre-trained large language models (LLMs) like OpenAI’s GPT with external knowledge sources stored in vector databases such as Milvus and Zilliz Cloud, allowing for more accurate, contextually relevant, and up-to-date response generation. A RAG pipeline usually consists of four basic components: a vector database, an embedding model, an LLM, and a framework.
Key Components We'll Use for This RAG Chatbot
This tutorial shows you how to build a simple RAG chatbot in Python using the following components:
- Haystack: An open-source Python framework designed for building production-ready NLP applications, particularly question answering and semantic search systems. Haystack excels at retrieving information from large document collections through its modular architecture that combines retrieval and reader components. Ideal for developers creating search applications, chatbots, and knowledge management systems that require efficient document processing and accurate information extraction from unstructured text.
- Haystack in-memory store: a very simple, in-memory document store with no extra services or dependencies. It is great for experimenting with Haystack, and we do not recommend using it for production. If you want a much more scalable solution for your apps or even enterprise projects, we recommend using Zilliz Cloud, which is a fully managed vector database service built on the open-source Milvusand offers a free tier supporting up to 1 million vectors.)
- Cohere Command R: A scalable enterprise AI model optimized for Retrieval-Augmented Generation (RAG), designed to handle complex workflows with high accuracy. Strengths include multilingual support, low-latency performance, and secure integration with business data. Ideal for automating customer support, data analysis, and generating context-aware insights from large datasets.
- BAAI llm-embedder: A unified embedding model designed to enhance retrieval-augmented LLMs by generating high-quality text representations. It excels in cross-domain knowledge integration, robustness, and semantic accuracy, making it ideal for retrieval systems, question answering, and textual analysis tasks requiring precise contextual understanding and scalability.
By the end of this tutorial, you’ll have a functional chatbot capable of answering questions based on a custom knowledge base.
Note: Since we may use proprietary models in our tutorials, make sure you have the required API key beforehand.
Step 1: Install and Set Up Haystack
import os
import requests
from haystack import Pipeline
from haystack.components.converters import MarkdownToDocument
from haystack.components.preprocessors import DocumentSplitter
from haystack.components.writers import DocumentWriter
Step 2: Install and Set Up Cohere Command R
To use Cohere models with Haystack for a RAG pipeline, you need to get a Cohere API Key first. You can write this key in:
- The
api_key
init parameter using Secret API - The
COHERE_API_KEY
environment variable (recommended)
Now, let's install and set up the Cohere model.
pip install cohere-haystack
from haystack_integrations.components.generators.cohere import CohereGenerator
generator = CohereGenerator(model="command-r")
Step 3: Install and Set Up BAAI llm-embedder
from haystack import Document
from haystack.components.embedders import SentenceTransformersDocumentEmbedder
from haystack.components.embedders import SentenceTransformersTextEmbedder
doc_embedder = SentenceTransformersDocumentEmbedder(model="BAAI/llm-embedder")
doc_embedder.warm_up()
text_embedder = SentenceTransformersTextEmbedder(model="BAAI/llm-embedder")
text_embedder.warm_up()
Step 4: Install and Set Up Haystack In-memory store
from haystack.document_stores.in_memory import InMemoryDocumentStore
from haystack.components.retrievers import InMemoryEmbeddingRetriever
document_store = InMemoryDocumentStore()
retriever=InMemoryEmbeddingRetriever(document_store=document_store))
Step 5: Build a RAG Chatbot
Now that you’ve set up all components, let’s start to build a simple chatbot. We’ll use the Milvus introduction doc as a private knowledge base. You can replace it your own dataset to customize your RAG chatbot.
url = 'https://raw.githubusercontent.com/milvus-io/milvus-docs/refs/heads/v2.5.x/site/en/about/overview.md'
example_file = 'example_file.md'
response = requests.get(url)
with open(example_file, 'wb') as f:
f.write(response.content)
file_paths = [example_file] # You can replace it with your own file paths.
indexing_pipeline = Pipeline()
indexing_pipeline.add_component("converter", MarkdownToDocument())
indexing_pipeline.add_component("splitter", DocumentSplitter(split_by="sentence", split_length=2))
indexing_pipeline.add_component("embedder", document_embedder)
indexing_pipeline.add_component("writer", DocumentWriter(document_store))
indexing_pipeline.connect("converter", "splitter")
indexing_pipeline.connect("splitter", "embedder")
indexing_pipeline.connect("embedder", "writer")
indexing_pipeline.run({"converter": {"sources": file_paths}})
# print("Number of documents:", document_store.count_documents())
question = "What is Milvus?" # You can replace it with your own question.
retrieval_pipeline = Pipeline()
retrieval_pipeline.add_component("embedder", text_embedder)
retrieval_pipeline.add_component("retriever", retriever)
retrieval_pipeline.connect("embedder", "retriever")
retrieval_results = retrieval_pipeline.run({"embedder": {"text": question}})
# for doc in retrieval_results["retriever"]["documents"]:
# print(doc.content)
# print("-" * 10)
from haystack.utils import Secret
from haystack.components.builders import PromptBuilder
retriever=InMemoryEmbeddingRetriever(document_store=document_store)
text_embedder = SentenceTransformersTextEmbedder(model="BAAI/llm-embedder")
text_embedder.warm_up()
prompt_template = """Answer the following query based on the provided context. If the context does
not include an answer, reply with 'I don't know'.\n
Query: {{query}}
Documents:
{% for doc in documents %}
{{ doc.content }}
{% endfor %}
Answer:
"""
rag_pipeline = Pipeline()
rag_pipeline.add_component("text_embedder", text_embedder)
rag_pipeline.add_component("retriever", retriever)
rag_pipeline.add_component("prompt_builder", PromptBuilder(template=prompt_template))
rag_pipeline.add_component("generator", generator)
rag_pipeline.connect("text_embedder.embedding", "retriever.query_embedding")
rag_pipeline.connect("retriever.documents", "prompt_builder.documents")
rag_pipeline.connect("prompt_builder", "generator")
results = rag_pipeline.run({"text_embedder": {"text": question}, "prompt_builder": {"query": question},})
print('RAG answer:\n', results["generator"]["replies"][0])
Optimization Tips
As you build your RAG system, optimization is key to ensuring peak performance and efficiency. While setting up the components is an essential first step, fine-tuning each one will help you create a solution that works even better and scales seamlessly. In this section, we’ll share some practical tips for optimizing all these components, giving you the edge to build smarter, faster, and more responsive RAG applications.
Haystack optimization tips
To optimize Haystack in a RAG setup, ensure you use an efficient retriever like FAISS or Milvus for scalable and fast similarity searches. Fine-tune your document store settings, such as indexing strategies and storage backends, to balance speed and accuracy. Use batch processing for embedding generation to reduce latency and optimize API calls. Leverage Haystack's pipeline caching to avoid redundant computations, especially for frequently queried documents. Tune your reader model by selecting a lightweight yet accurate transformer-based model like DistilBERT to speed up response times. Implement query rewriting or filtering techniques to enhance retrieval quality, ensuring the most relevant documents are retrieved for generation. Finally, monitor system performance with Haystack’s built-in evaluation tools to iteratively refine your setup based on real-world query performance.
Haystack in-memory store optimization tips
Haystack in-memory store is just a very simple, in-memory document store with no extra services or dependencies. We recommend that you just experiment it with RAG pipeline within your Haystack framework, and we do not recommend using it for production. If you want a much more scalable solution for your apps or even enterprise projects, we recommend using Zilliz Cloud, which is a fully managed vector database service built on the open-source Milvusand offers a free tier supporting up to 1 million vectors
Cohere Command R optimization tips
To optimize Cohere Command R in a RAG setup, fine-tune prompts for clarity and specificity, using explicit instructions to guide context-aware responses. Limit input context to relevant chunks (e.g., 256-512 tokens) to reduce noise and computational overhead. Adjust temperature and top-p values to balance creativity and factual accuracy—lower values enhance precision for retrieval tasks. Implement query augmentation (e.g., synonyms, rephrasing) to improve retrieval alignment. Use Cohere’s built-in reranking to prioritize high-confidence documents. Regularly validate outputs against source data to minimize hallucinations and ensure consistency. Profile latency and batch requests where possible for scalability.
BAAI llm-embedder optimization tips
Optimize BAAI llm-embedder in RAG by normalizing input text (lowercasing, removing special characters) to reduce noise, batching inference for efficiency, and fine-tuning on domain-specific data if labeled examples are available. Use dynamic truncation or padding to handle variable-length inputs, and cache frequent queries to minimize recomputation. Experiment with pooling strategies (e.g., CLS token vs. mean-pooling) for optimal semantic capture. Regularly evaluate retrieval accuracy via recall@k metrics and consider hybrid retrieval (dense + sparse) to balance precision and coverage. Monitor latency and memory usage to scale effectively.
By implementing these tips across your components, you'll be able to enhance the performance and functionality of your RAG system, ensuring it’s optimized for both speed and accuracy. Keep testing, iterating, and refining your setup to stay ahead in the ever-evolving world of AI development.
RAG Cost Calculator: A Free Tool to Calculate Your Cost in Seconds
Estimating the cost of a Retrieval-Augmented Generation (RAG) pipeline involves analyzing expenses across vector storage, compute resources, and API usage. Key cost drivers include vector database queries, embedding generation, and LLM inference.
RAG Cost Calculator is a free tool that quickly estimates the cost of building a RAG pipeline, including chunking, embedding, vector storage/search, and LLM generation. It also helps you identify cost-saving opportunities and achieve up to 10x cost reduction on vector databases with the serverless option.
Calculate your RAG cost
What Have You Learned?
By diving into this tutorial, you’ve unlocked the magic of building a RAG system from the ground up using powerful, modern tools! You learned how Haystack acts as the backbone, seamlessly stitching together every component into a smooth, functional pipeline. The Haystack In-memory Store became your go-to for blazing-fast vector storage and retrieval, proving that you don’t always need complex infrastructure to handle real-time semantic searches. Then came Cohere’s Command R, the LLM powerhouse that transforms your retrieved context into human-like, nuanced responses—whether answering questions, summarizing content, or sparking creative ideas. And let’s not forget the BAAI llm-embedder, which turned raw text into rich, meaningful embeddings, ensuring your system understands the nuances of language and delivers precise results. Together, these tools showed you how to craft a RAG application that’s not just functional but elegant in its simplicity and efficiency.
But wait—there’s more! You also picked up pro tips for optimizing performance, like tweaking chunk sizes or adjusting similarity thresholds, to squeeze every drop of potential from your system. And that free RAG cost calculator? It’s your secret weapon for balancing quality and budget, making sure your projects stay scalable without breaking the bank. Now that you’ve seen how these pieces fit together, imagine what’s next. You’re equipped to experiment, innovate, and build RAG applications that could revolutionize how people interact with information. So what are you waiting for? Grab these tools, play with their capabilities, and start creating. The future of intelligent systems is in your hands—go make it unforgettable! 🚀
Further Resources
🌟 In addition to this RAG tutorial, unleash your full potential with these incredible resources to level up your RAG skills.
- How to Build a Multimodal RAG | Documentation
- How to Enhance the Performance of Your RAG Pipeline
- Graph RAG with Milvus | Documentation
- How to Evaluate RAG Applications - Zilliz Learn
- Generative AI Resource Hub | Zilliz
We'd Love to Hear What You Think!
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- Introduction to RAG
- Key Components We'll Use for This RAG Chatbot
- Step 1: Install and Set Up Haystack
- Step 2: Install and Set Up Cohere Command R
- Step 3: Install and Set Up BAAI llm-embedder
- Step 4: Install and Set Up Haystack In-memory store
- Step 5: Build a RAG Chatbot
- Optimization Tips
- RAG Cost Calculator: A Free Tool to Calculate Your Cost in Seconds
- What Have You Learned?
- Further Resources
- We'd Love to Hear What You Think!
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